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32 relations: Biochemistry, Biomarker, Body fluid, ChEBI, Chemical structure, Clinical chemistry, Disease, DNA, DrugBank, Food additive, FooDB, Gas chromatography–mass spectrometry, GenBank, Genome Canada, KEGG, Liquid chromatography–mass spectrometry, List of biological databases, Metabolite, Metabolome, Metabolomics, MetaCyc, Molecular biology, Nuclear magnetic resonance spectroscopy, Pollutant, Protein, Protein Data Bank, PubChem, Relational database, Small molecule, Small Molecule Pathway Database, Toxin, UniProt.
Biochemistry
Biochemistry, sometimes called biological chemistry, is the study of chemical processes within and relating to living organisms.
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Biomarker
A biomarker, or biological marker, generally refers to a measurable indicator of some biological state or condition.
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Body fluid
Body fluid, bodily fluids, or biofluids are liquids within the bodies of living people.
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ChEBI
Chemical Entities of Biological Interest, also known as ChEBI, is a database and ontology of molecular entities focused on 'small' chemical compounds, that is part of the Open Biomedical Ontologies effort.
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Chemical structure
A chemical structure determination includes a chemist's specifying the molecular geometry and, when feasible and necessary, the electronic structure of the target molecule or other solid.
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Clinical chemistry
Clinical chemistry (also known as chemical pathology, clinical biochemistry or medical biochemistry) is the area of chemistry that is generally concerned with analysis of bodily fluids for diagnostic and therapeutic purposes.
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Disease
A disease is any condition which results in the disorder of a structure or function in an organism that is not due to any external injury.
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DNA
Deoxyribonucleic acid (DNA) is a thread-like chain of nucleotides carrying the genetic instructions used in the growth, development, functioning and reproduction of all known living organisms and many viruses.
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DrugBank
The DrugBank database is a comprehensive, freely accessible, online database containing information on drugs and drug targets.
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Food additive
Food additives are substances added to food to preserve flavor or enhance its taste, appearance, or other qualities.
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FooDB
FooDB (The Food Database) is a freely available, open-access database containing chemical (micronutrient and macronutrient) composition data on common, unprocessed foods.
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Gas chromatography–mass spectrometry
Gas chromatography–mass spectrometry (GC-MS) is an analytical method that combines the features of gas-chromatography and mass spectrometry to identify different substances within a test sample.
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GenBank
The GenBank sequence database is an open access, annotated collection of all publicly available nucleotide sequences and their protein translations.
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Genome Canada
Genome Canada is a non-profit organization that aims to use genomics-based technologies to improve the lives of Canadians.
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KEGG
KEGG (Kyoto Encyclopedia of Genes and Genomes) is a collection of databases dealing with genomes, biological pathways, diseases, drugs, and chemical substances.
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Liquid chromatography–mass spectrometry
Liquid chromatography–mass spectrometry (LC-MS) is an analytical chemistry technique that combines the physical separation capabilities of liquid chromatography (or HPLC) with the mass analysis capabilities of mass spectrometry (MS).
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List of biological databases
Biological databases are stores of biological information.
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Metabolite
A metabolite is the intermediate end product of metabolism.
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Metabolome
The metabolome refers to the complete set of small-molecule chemicals found within a biological sample.
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Metabolomics
Metabolomics is the scientific study of chemical processes involving metabolites, the small molecule intermediates and products of metabolism.
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MetaCyc
The MetaCyc database contains extensive information on metabolic pathways and enzymes from many organisms.
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Molecular biology
Molecular biology is a branch of biology which concerns the molecular basis of biological activity between biomolecules in the various systems of a cell, including the interactions between DNA, RNA, proteins and their biosynthesis, as well as the regulation of these interactions.
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Nuclear magnetic resonance spectroscopy
Nuclear magnetic resonance spectroscopy, most commonly known as NMR spectroscopy or magnetic resonance spectroscopy (MRS), is a spectroscopic technique to observe local magnetic fields around atomic nuclei.
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Pollutant
A pollutant is a substance or energy introduced into the environment that has undesired effects, or adversely affects the usefulness of a resource.
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Protein
Proteins are large biomolecules, or macromolecules, consisting of one or more long chains of amino acid residues.
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Protein Data Bank
The Protein Data Bank (PDB) is a crystallographic database for the three-dimensional structural data of large biological molecules, such as proteins and nucleic acids.
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PubChem
PubChem is a database of chemical molecules and their activities against biological assays.
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Relational database
A relational database is a digital database based on the relational model of data, as proposed by E. F. Codd in 1970.
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Small molecule
Within the fields of molecular biology and pharmacology, a small molecule is a low molecular weight (< 900 daltons) organic compound that may regulate a biological process, with a size on the order of 1 nm.
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Small Molecule Pathway Database
The Small Molecule Pathway Database (SMPDB) is a comprehensive, high-quality, freely accessible, online database containing more than 600 small molecule (i.e. metabolic) pathways found in humans.
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Toxin
A toxin (from toxikon) is a poisonous substance produced within living cells or organisms; synthetic toxicants created by artificial processes are thus excluded.
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UniProt
UniProt is a freely accessible database of protein sequence and functional information, many entries being derived from genome sequencing projects.
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Redirects here:
HMDB, Human Metabolome Project, Human Metabolomics Project.
References
[1] https://en.wikipedia.org/wiki/Human_Metabolome_Database
