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Resolution by Proxy

Index Resolution by Proxy

Resolution by Proxy (ResProx) is a method for assessing the equivalent X-ray resolution of NMR-derived protein structures. [1]

13 relations: Carbon, Coordinate system, De novo protein structure prediction, Hydrogen atom, Mean absolute error, Nitrogen, Nuclear magnetic resonance, Oxygen, Protein Data Bank, Protein structure, Root-mean-square deviation, X-ray, X-ray crystallography.

Carbon

Carbon (from carbo "coal") is a chemical element with symbol C and atomic number 6.

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Coordinate system

In geometry, a coordinate system is a system which uses one or more numbers, or coordinates, to uniquely determine the position of the points or other geometric elements on a manifold such as Euclidean space.

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De novo protein structure prediction

In computational biology, de novo protein structure prediction refers to an algorithmic process by which protein tertiary structure is predicted from its amino acid primary sequence.

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Hydrogen atom

A hydrogen atom is an atom of the chemical element hydrogen.

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Mean absolute error

In statistics, mean absolute error (MAE) is a measure of difference between two continuous variables.

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Nitrogen

Nitrogen is a chemical element with symbol N and atomic number 7.

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Nuclear magnetic resonance

Nuclear magnetic resonance (NMR) is a physical phenomenon in which nuclei in a magnetic field absorb and re-emit electromagnetic radiation.

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Oxygen

Oxygen is a chemical element with symbol O and atomic number 8.

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Protein Data Bank

The Protein Data Bank (PDB) is a crystallographic database for the three-dimensional structural data of large biological molecules, such as proteins and nucleic acids.

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Protein structure

Protein structure is the three-dimensional arrangement of atoms in an amino acid-chain molecule.

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Root-mean-square deviation

The root-mean-square deviation (RMSD) or root-mean-square error (RMSE) (or sometimes root-mean-squared error) is a frequently used measure of the differences between values (sample or population values) predicted by a model or an estimator and the values observed.

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X-ray

X-rays make up X-radiation, a form of electromagnetic radiation.

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X-ray crystallography

X-ray crystallography is a technique used for determining the atomic and molecular structure of a crystal, in which the crystalline atoms cause a beam of incident X-rays to diffract into many specific directions.

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References

[1] https://en.wikipedia.org/wiki/Resolution_by_Proxy

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