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44 relations: 'The All-Species Living Tree' Project, Acylurea, Agar plate, Agrobacterium tumefaciens, Alphaproteobacteria, Ammonia, Arthrobacter, Arthrobacter viscosus, Bacteria, Bergey's Manual of Systematic Bacteriology, Endosymbiont, Genetic linkage, Genus, Glutamine, Gram-negative bacteria, Legume, List of Prokaryotic names with Standing in Nomenclature, Micrococcaceae, Microorganism, National Center for Biotechnology Information, Neorhizobium galegae, Neorhizobium huautlense, Nitrogen fixation, Norwich Research Park, Organic compound, Photosynthesis, Proteobacteria, Rhizobia, Rhizobiaceae, Rhizobiales, Rhizobium bangladeshense, Rhizobium binae, Rhizobium gallicum, Rhizobium hainanense, Rhizobium indigoferae, Rhizobium leguminosarum, Rhizobium lentis, Rhizobium loessense, Rhizobium lusitanum, Rhizobium mongolense, Rhizobium rhizogenes, Root nodule, SILVA ribosomal RNA database, Soil.
'The All-Species Living Tree' Project
'The All-Species Living Tree' Project is a collaboration between various academic groups/institutes, such as ARB, SILVA rRNA database project, and LPSN, with the aim of assembling a database of 16S rRNA sequences of all validly published species of Bacteria and Archaea.
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Acylurea
Acylureas (also called N-acylureas or ureides) are a class of chemical compounds formally derived from the acylation of urea.
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Agar plate
An agar plate is a Petri dish that contains a solid growth medium, typically agar plus nutrients, used to culture small organisms such as microorganisms.
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Agrobacterium tumefaciens
Agrobacterium tumefaciens (updated scientific name Rhizobium radiobacter, synonym Agrobacterium radiobacter) is the causal agent of crown gall disease (the formation of tumours) in over 140 species of eudicots.
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Alphaproteobacteria
Alphaproteobacteria is a class of bacteria in the phylum Proteobacteria (See also bacterial taxonomy).
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Ammonia
Ammonia is a compound of nitrogen and hydrogen with the formula NH3.
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Arthrobacter
Arthrobacter (from the Greek, "jointed small stick”) is a genus of bacteria that is commonly found in soil.
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Arthrobacter viscosus
Arthrobacter viscosus is a bacterium species misidentified from the genus of Arthrobacter which has been isolated from soil from the city airport in Guatemala.
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Bacteria
Bacteria (common noun bacteria, singular bacterium) is a type of biological cell.
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Bergey's Manual of Systematic Bacteriology
Bergey’s Manual of Systematic Bacteriology is the main resource for determining the identity of prokaryotic organisms, emphasizing bacterial species, using every characterizing aspect.
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Endosymbiont
An endosymbiont or endobiont is any organism that lives within the body or cells of another organism in a symbiotic relationship with the host body or cell, often but not always to mutual benefit.
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Genetic linkage
Genetic linkage is the tendency of DNA sequences that are close together on a chromosome to be inherited together during the meiosis phase of sexual reproduction.
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Genus
A genus (genera) is a taxonomic rank used in the biological classification of living and fossil organisms, as well as viruses, in biology.
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Glutamine
Glutamine (symbol Gln or Q) is an α-amino acid that is used in the biosynthesis of proteins.
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Gram-negative bacteria
Gram-negative bacteria are bacteria that do not retain the crystal violet stain used in the gram-staining method of bacterial differentiation.
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Legume
A legume is a plant or its fruit or seed in the family Fabaceae (or Leguminosae).
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List of Prokaryotic names with Standing in Nomenclature
List of Prokaryotic names with Standing in Nomenclature (LPSN) is an online database that maintains information on the naming and taxonomy of prokaryotes, following the taxonomy requirements and rulings of the International Code of Nomenclature of Bacteria.
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Micrococcaceae
The family Micrococcaceae includes bacterial genera of Gram positive cocci that inhabit the air and skin, such as Micrococcus luteus.
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Microorganism
A microorganism, or microbe, is a microscopic organism, which may exist in its single-celled form or in a colony of cells. The possible existence of unseen microbial life was suspected from ancient times, such as in Jain scriptures from 6th century BC India and the 1st century BC book On Agriculture by Marcus Terentius Varro. Microbiology, the scientific study of microorganisms, began with their observation under the microscope in the 1670s by Antonie van Leeuwenhoek. In the 1850s, Louis Pasteur found that microorganisms caused food spoilage, debunking the theory of spontaneous generation. In the 1880s Robert Koch discovered that microorganisms caused the diseases tuberculosis, cholera and anthrax. Microorganisms include all unicellular organisms and so are extremely diverse. Of the three domains of life identified by Carl Woese, all of the Archaea and Bacteria are microorganisms. These were previously grouped together in the two domain system as Prokaryotes, the other being the eukaryotes. The third domain Eukaryota includes all multicellular organisms and many unicellular protists and protozoans. Some protists are related to animals and some to green plants. Many of the multicellular organisms are microscopic, namely micro-animals, some fungi and some algae, but these are not discussed here. They live in almost every habitat from the poles to the equator, deserts, geysers, rocks and the deep sea. Some are adapted to extremes such as very hot or very cold conditions, others to high pressure and a few such as Deinococcus radiodurans to high radiation environments. Microorganisms also make up the microbiota found in and on all multicellular organisms. A December 2017 report stated that 3.45 billion year old Australian rocks once contained microorganisms, the earliest direct evidence of life on Earth. Microbes are important in human culture and health in many ways, serving to ferment foods, treat sewage, produce fuel, enzymes and other bioactive compounds. They are essential tools in biology as model organisms and have been put to use in biological warfare and bioterrorism. They are a vital component of fertile soils. In the human body microorganisms make up the human microbiota including the essential gut flora. They are the pathogens responsible for many infectious diseases and as such are the target of hygiene measures.
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National Center for Biotechnology Information
The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health (NIH).
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Neorhizobium galegae
Neorhizobium galegae is a Gram negative root nodule bacteria.
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Neorhizobium huautlense
Neorhizobium huautlense is a Gram negative root nodule bacteria.
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Nitrogen fixation
Nitrogen fixation is a process by which nitrogen in the Earth's atmosphere is converted into ammonia (NH3) or other molecules available to living organisms.
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Norwich Research Park
Norwich Research Park is a business community with world leading science credentials located to the southwest of Norwich, Norfolk, in East Anglia, England close to the A11 and the A47 roads.
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Organic compound
In chemistry, an organic compound is generally any chemical compound that contains carbon.
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Photosynthesis
Photosynthesis is a process used by plants and other organisms to convert light energy into chemical energy that can later be released to fuel the organisms' activities (energy transformation).
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Proteobacteria
Proteobacteria is a major phylum of gram-negative bacteria. They include a wide variety of pathogens, such as Escherichia, Salmonella, Vibrio, Helicobacter, Yersinia, Legionellales, and many other notable genera. Others are free-living (non-parasitic), and include many of the bacteria responsible for nitrogen fixation. Carl Woese established this grouping in 1987, calling it informally the "purple bacteria and their relatives". Because of the great diversity of forms found in this group, it was named after Proteus, a Greek god of the sea capable of assuming many different shapes and is not named after the genus Proteus. Some Alphaproteobacteria can grow at very low levels of nutrients and have unusual morphology such as stalks and buds. Others include agriculturally important bacteria capable of inducing nitrogen fixation in symbiosis with plants. The type order is the Caulobacterales, comprising stalk-forming bacteria such as Caulobacter. The Betaproteobacteria are highly metabolically diverse and contain chemolithoautotrophs, photoautotrophs, and generalist heterotrophs. The type order is the Burkholderiales, comprising an enormous range of metabolic diversity, including opportunistic pathogens. The Hydrogenophilalia are obligate thermophiles and include heterotrophs and autotrophs. The type order is the Hydrogenophilales. The Gammaproteobacteria are the largest class in terms of species with validly published names. The type order is the Pseudomonadales, which include the genera Pseudomonas and the nitrogen-fixing Azotobacter. The Acidithiobacillia contain only sulfur, iron and uranium-oxidising autotrophs. The type order is the Acidithiobacillales, which includes economically important organisms used in the mining industry such as Acidithiobacillus spp. The Deltaproteobacteria include bacteria that are predators on other bacteria and are important contributors to the anaerobic side of the sulfur cycle. The type order is the Myxococcales, which includes organisms with self-organising abilities such as Myxococcus spp. The Epsilonproteobacteria are often slender, Gram-negative rods that are helical or curved. The type order is the Campylobacterales, which includes important food pathogens such as Campylobacter spp. The Oligoflexia are filamentous aerobes. The type order is the Oligoflexales, which contains the genus Oligoflexus.
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Rhizobia
Rhizobia are bacteria that fix nitrogen (diazotrophs) after becoming established inside root nodules of legumes (Fabaceae).
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Rhizobiaceae
The Rhizobiaceae is a family of proteobacteria comprising multiple subgroups that enhance and hinder plant development.
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Rhizobiales
The Rhizobiales are an order of Gram-negative Alphaproteobacteria.
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Rhizobium bangladeshense
Rhizobium bangladeshense is a gram-negative bacterium which was isolated from root nodules of lentils in Bangladesh.
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Rhizobium binae
Rhizobium binae is a gram-negative bacterium which was isolated from root nodules of lentils in Bangladesh.
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Rhizobium gallicum
Rhizobium gallicum is a Gram-negative root-nodule bacterium.
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Rhizobium hainanense
Rhizobium hainanense is a Gram negative root nodule bacteria.
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Rhizobium indigoferae
Rhizobium indigoferae is a Gram negative root nodule bacteria, which nodulates and forms nitrogen-fixing symbioses with Indigofera species Its type strain is CCBAU 71714(T) (.
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Rhizobium leguminosarum
Rhizobium leguminosarum is a bacterium which lives in a mutualistic symbiotic relationship with legumes, and has the ability to fix free nitrogen from the air.
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Rhizobium lentis
Rhizobium lentis is a gram-negative bacterium which was isolated from root nodules of lentils in Bangladesh.
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Rhizobium loessense
Rhizobium loessense is a root nodule bacteria, first isolated from nodules of Astragalus and Lespedeza species.
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Rhizobium lusitanum
Rhizobium lusitanum is a Gram negative root nodule bacteria, specifically nodulating Phaseolus vulgaris.
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Rhizobium mongolense
Rhizobium mongolense is a Gram negative root nodule bacteria, which nodulates and forms nitrogen-fixing symbioses with Medicago ruthenica.
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Rhizobium rhizogenes
Rhizobium rhizogenes (formerly Agrobacterium rhizogenes) is a Gram-negative soil bacterium that produces hairy root disease in dicotyledonous plants.
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Root nodule
Root nodules occur on the roots of plants (primarily Fabaceae) that associate with symbiotic nitrogen-fixing bacteria.
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SILVA ribosomal RNA database
SILVA is a ribosomal RNA database established in collaboration between the Microbial Genomics Group at the Max Planck Institute for Marine Microbiology in Bremen, Germany, the Department of Microbiology at the Technical University Munich, and Ribocon.
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Soil
Soil is a mixture of organic matter, minerals, gases, liquids, and organisms that together support life.
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References
[1] https://en.wikipedia.org/wiki/Rhizobium
