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Vaa3D

Index Vaa3D

Vaa3D (in Chinese ‘挖三维’) is an Open Source visualization and analysis software suite created mainly by Hanchuan Peng and his team at Janelia Research Campus, HHMI and Allen Institute for Brain Science. [1]

21 relations: Allen Institute for Brain Science, Brain mapping, C++, Confocal microscopy, Drosophilidae, Howard Hughes Medical Institute, Image registration, Janelia Research Campus, MATLAB, Microscopy, National Academy of Sciences, Nature Methods, Neuronal tracing, Neuroscience, Open-source model, OpenCV, OpenGL, Plug-in (computing), Qt (software), Volume rendering, WYSIWYG.

Allen Institute for Brain Science

The Allen Institute for Brain Science is a Seattle-based independent, nonprofit medical research organization dedicated to accelerating the understanding of how the human brain works.

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Brain mapping

Brain mapping is a set of neuroscience techniques predicated on the mapping of (biological) quantities or properties onto spatial representations of the (human or non-human) brain resulting in maps.

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C++

C++ ("see plus plus") is a general-purpose programming language.

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Confocal microscopy

Confocal microscopy, most frequently confocal laser scanning microscopy (CLSM) or laser confocal scanning microscopy (LCSM), is an optical imaging technique for increasing optical resolution and contrast of a micrograph by means of using a spatial pinhole to block out-of-focus light in image formation.

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Drosophilidae

The Drosophilidae are a diverse, cosmopolitan family of flies, which includes fruit flies.

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Howard Hughes Medical Institute

The Howard Hughes Medical Institute (HHMI) is an American non-profit medical research organization based in Chevy Chase, Maryland.

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Image registration

Image registration is the process of transforming different sets of data into one coordinate system.

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Janelia Research Campus

Janelia Research Campus is a research campus of the Howard Hughes Medical Institute that opened in October 2006, after ground was broken in 2000.

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MATLAB

MATLAB (matrix laboratory) is a multi-paradigm numerical computing environment and proprietary programming language developed by MathWorks.

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Microscopy

Microscopy is the technical field of using microscopes to view objects and areas of objects that cannot be seen with the naked eye (objects that are not within the resolution range of the normal eye).

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National Academy of Sciences

The National Academy of Sciences (NAS) is a United States nonprofit, non-governmental organization.

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Nature Methods

Nature Methods is a monthly peer-reviewed scientific journal covering new scientific techniques.

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Neuronal tracing

Neuronal tracing, or neuron reconstruction is a technique used in neuroscience to determine the pathway of the neurites or neuronal processes, the axons and dendrites, of a neuron.

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Neuroscience

Neuroscience (or neurobiology) is the scientific study of the nervous system.

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Open-source model

The open-source model is a decentralized software-development model that encourages open collaboration.

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OpenCV

OpenCV (Open Source Computer Vision) is a library of programming functions mainly aimed at real-time computer vision.

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OpenGL

Open Graphics Library (OpenGL) is a cross-language, cross-platform application programming interface (API) for rendering 2D and 3D vector graphics.

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Plug-in (computing)

In computing, a plug-in (or plugin, add-in, addin, add-on, addon, or extension) is a software component that adds a specific feature to an existing computer program.

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Qt (software)

Qt ("cute") is a cross-platform application framework and widget toolkit for creating classic and embedded graphical user interfaces, and applications that run on various software and hardware platforms with little or no change in the underlying codebase, while still being a native application with native capabilities and speed.

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Volume rendering

In scientific visualization and computer graphics, volume rendering is a set of techniques used to display a 2D projection of a 3D discretely sampled data set, typically a 3D scalar field.

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WYSIWYG

WYSIWYG is an acronym for "what you see is what you get".

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References

[1] https://en.wikipedia.org/wiki/Vaa3D

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