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Microbial ecology

Index Microbial ecology

Microbial ecology (or environmental microbiology) is the ecology of microorganisms: their relationship with one another and with their environment. [1]

108 relations: A.C. Redfield Lifetime Achievement Award, American Academy of Environmental Engineers and Scientists, Applied and Environmental Microbiology, Azotobacter, Bacterial taxonomy, Bigelow Laboratory for Ocean Sciences, Bioaugmentation, Branches of microbiology, Bruce Rittmann, Carl Woese, Carnus hemapterus, Center for Microbial Oceanography: Research and Education, Cochin University of Science and Technology, Community Cyberinfrastructure for Advanced Microbial Ecology Research and Analysis, Community respiration, Cristina Takacs-Vesbach, Daniel Oerther, David Stahl (biologist), E. O. Wilson, Ecology (disciplines), Environmental biotechnology, Eugene Rosenberg, European Working Group for Legionella Infections, FEMS Microbiology Ecology, Fluorescence in situ hybridization, Food microbiology, Forest Rohwer, G. David Tilman, Genetic demixing, Genomics, Geobiology, Glossary of ecology, Gram stain, Green nanotechnology, Harry J. Gilbert, Human Microbiome Project, Hybridization probe, Index of biophysics articles, Index of sustainability articles, International Society for Microbial Ecology, Isolation (microbiology), James I. Prosser, Jenny Baeseman, Jessica Green, Jillian Banfield, John Cairney (mycologist), Jonathan Eisen, Journal of Ecology, Julie Huber, Kate Scow, ..., Kellogg Biological Station, Legionella, Library of Congress Classification:Class Q -- Science, Lily Young, List of MeSH codes (G01), List of MeSH codes (G03), List of MeSH codes (H01), Marine Biological Laboratory, Marine microorganism, Martinus Beijerinck, Mary Voytek, Metagenomics, Michael James (producer), Michigan State University Libraries, Microbial biodegradation, Microbial biogeography, Microbial dark matter, Microbial enhanced oil recovery, Microbial metabolism, Microbial population biology, Microbiological Research, Microbiomes of the built environment, Milton Wainwright, Moshe Shilo, Neorhizobium huautlense, Nitrogen-15 tracing, Oral ecology, Oral microbiology, Outline of ecology, Outline of fishing, Pauline Mele, Phospholipid-derived fatty acids, Phylosymbiosis, Pityriasis amiantacea, Plymouth Marine Laboratory, Priming (microbiology), QIIME, Rare biosphere, Richard Bartha, Richard Lenski, Robert Hungate, Sergei Winogradsky, Silicibacter pomeroyi, Skin flora, Soda lake, Stable-isotope probing, Steven D'Hondt, Streamlining theory, Succinic acid fermentation, Sulfide intrusion, The Geochemist's Workbench, The ISME Journal, Trista Vick-Majors, UniFrac, University of Texas at San Antonio College of Sciences, Velvl Greene, Vivian Pellizari, Zetaproteobacteria. Expand index (58 more) »

A.C. Redfield Lifetime Achievement Award

The Lifetime Achievement Award was first presented in 1994 to honor major long-term achievements in the fields of limnology and oceanography, including research, education and service to the community and society.

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American Academy of Environmental Engineers and Scientists

The American Academy of Environmental Engineers and Scientists (AAEES) is a society of professional engineers and scientists who have demonstrated special expertise in environmental engineering or science beyond that normally required for professional practice, in a process similar to what is required for medical and other professional specialty certifications.

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Applied and Environmental Microbiology

Applied and Environmental Microbiology is a biweekly peer-reviewed scientific journal published by the American Society for Microbiology.

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Azotobacter

Azotobacter is a genus of usually motile, oval or spherical bacteria that form thick-walled cysts and may produce large quantities of capsular slime.

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Bacterial taxonomy

Bacterial taxonomy is the taxonomy, i.e. the rank-based classification, of bacteria.

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Bigelow Laboratory for Ocean Sciences

Bigelow Laboratory for Ocean Sciences, founded in 1974, is a private, non-profit center for global oceanography, ocean science education, and technology transfer.

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Bioaugmentation

Biological augmentation is the addition of archaea or bacterial cultures required to speed up the rate of degradation of a contaminant.

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Branches of microbiology

The branches of microbiology can be classified into pure and applied sciences.

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Bruce Rittmann

Bruce E. Rittmann is Regents' Professor of Environmental Engineering and Director of the at the Biodesign Institute of Arizona State University, and a member of both the Civil Engineering and the Chemical Engineering Sections of the National Academy of Engineering.

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Carl Woese

Carl Richard Woese (July 15, 1928 – December 30, 2012) was an American microbiologist and biophysicist.

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Carnus hemapterus

Carnus hemapterus is a Dipteran insect, a small-bodied and partly black-coloured carnid fly.

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Center for Microbial Oceanography: Research and Education

The Center for Microbial Oceanography (C-MORE) is a research and education organization established in 2006 as a National Science Foundation funded Science and Technology Center.

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Cochin University of Science and Technology

Cochin University of Science and Technology (CUSAT) is a government-owned autonomous science and technology university in Kochi, Kerala, India.

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Community Cyberinfrastructure for Advanced Microbial Ecology Research and Analysis

CAMERA, or the Community Cyberinfrastructure for Advanced Microbial Ecology Research and Analysis, is an online cloud computing service that provides hosted software tools and a high-performance computing infrastructure for the analysis of metagenomic data.

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Community respiration

Community respiration (CR) refers to the total amount of carbon-dioxide that is produced by individuals organisms in a given community, originating from the cellular respiration of organic material.

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Cristina Takacs-Vesbach

Cristina Takacs-Vesbach (born 1968) is an American microbial ecologist studying microbes in Antarctica's McMurdo Dry Valleys.

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Daniel Oerther

Daniel Barton Oerther (born October 11, 1972) is an American social entrepreneur, diplomat, and Professor of Environmental Health Engineering.

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David Stahl (biologist)

David A. Stahl is an American scientist and Professor of Environmental Engineering.

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E. O. Wilson

Edward Osborne Wilson (born June 10, 1929), usually cited as E. O. Wilson, is an American biologist, researcher, theorist, naturalist and author.

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Ecology (disciplines)

Ecology is a broad biological science and can be divided into many sub-disciplines using various criteria.

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Environmental biotechnology

Environmental biotechnology is biotechnology that is applied to and used to study the natural environment.

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Eugene Rosenberg

Eugene Rosenberg (יוג'ין רוזנברג.) (October 16, 1935) is a microbiologist at the Faculty of Life Sciences at Tel Aviv University., an expert in the field of applied environmental microbiology, in particular his work on Myxobacteria, microorganisms to combat pollution (bioremediation), and the Hologenome theory of evolution.

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European Working Group for Legionella Infections

The European Working Group for Legionella Infections (EWGLI) was formed in 1986.

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FEMS Microbiology Ecology

FEMS Microbiology Ecology is one of the five FEMS, free to publish, print and online peer-reviewed scientific journals, which covers all aspects of microbial ecology.

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Fluorescence in situ hybridization

Fluorescent in situ hybridization (FISH) is a molecular cytogenetic technique that uses fluorescent probes that bind to only those parts of the chromosome with a high degree of sequence complementarity.

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Food microbiology

Food microbiology is the study of the microorganisms that inhabit, create, or contaminate food, including the study of microorganisms causing food spoilage, pathogens that may cause disease especially if food is improperly cooked or stored, those used to produce fermented foods such as cheese, yogurt, bread, beer, and wine, and those with other useful roles such as producing probiotics.

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Forest Rohwer

Forest Rohwer (born 1969) is an American microbial ecologist and Professor of Biology at San Diego State University.

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G. David Tilman

George David Tilman (born July 22, 1949) is an American ecologist.

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Genetic demixing

In biology, genetic demixing refers to a phenomenon in which an initial mixture of individuals with two or more distinct genotypes rearranges in the course of time, giving birth to a spatial organization where some or all genotypes are concentrated in distinct patches.

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Genomics

Genomics is an interdisciplinary field of science focusing on the structure, function, evolution, mapping, and editing of genomes.

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Geobiology

Geobiology is a field of scientific research that explores the interactions between the physical Earth and the biosphere.

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Glossary of ecology

This glossary of ecology is a list of definitions of terms and topics in ecology and related fields.

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Gram stain

Gram stain or Gram staining, also called Gram's method, is a method of staining used to distinguish and classify bacterial species into two large groups (gram-positive and gram-negative).

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Green nanotechnology

Green nanotechnology refers to the use of nanotechnology to enhance the environmental sustainability of processes producing negative externalities.

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Harry J. Gilbert

Harry J. Gilbert FRS FMedSci (born 1953) is Professor of Agricultural Biochemistry and Nutrition in the Institute For Cell and Molecular Biosciences at Newcastle University.

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Human Microbiome Project

The Human Microbiome Project (HMP) was a United States National Institutes of Health (NIH) research initiative to improve understanding of the microbial flora involved in human health and disease.

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Hybridization probe

In molecular biology, a hybridization probe is a fragment of DNA or RNA of variable length (usually 100–1000 bases long) which can be radioactively labeled.

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Index of biophysics articles

This is a list of articles on biophysics.

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Index of sustainability articles

This page is an index of sustainability articles.

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International Society for Microbial Ecology

The International Society for Microbial Ecology (ISME) is the principal scientific society for the burgeoning field of microbial ecology and its related disciplines.

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Isolation (microbiology)

In microbiology, the term isolation refers to the separation of a strain from a natural, mixed population of living microbes, as present in the environment, for example in water or soil flora, or from living beings with skin flora, oral flora or gut flora, in order to identify the microbe(s) of interest.

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James I. Prosser

James Ivor Prosser (born July 1951) FRS FRSE OBE is a Professor in Environmental Microbiology in the Institute of Biological and Environmental Sciences at the University of Aberdeen.

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Jenny Baeseman

Jenny Baeseman is an American polar researcher who studies the survival mechanisms of bacteria in cold environments.

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Jessica Green

Jessica Green is an American engineer, ecologist, and entrepreneur whose research focuses on Microbial Ecology and Genomics.

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Jillian Banfield

Jillian Fiona Banfield (born Armidale, Australia) is Professor at the University of California, Berkeley with appointments in the Earth Science, Ecosystem Science and Materials Science and Engineering departments.

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John Cairney (mycologist)

John William Gibson Cairney (1959–2012) was an eminent Scottish–Australian mycologist and Director of the UWS Centre for Plants and the Environment.

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Jonathan Eisen

Jonathan Andrew Eisen (born August 31, 1968) is an American evolutionary biologist, currently working at University of California, Davis.

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Journal of Ecology

The Journal of Ecology is a bimonthly peer-reviewed scientific journal covering all aspects of the ecology of plants.

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Julie Huber

Julie Huber is an Associate Scientist in the Marine Chemistry and Geochemistry department at Woods Hole Oceanographic Institution.

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Kate Scow

Kate M. Scow is an American Professor of soil science and microbial ecology at the University of California, Davis.

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Kellogg Biological Station

Kellogg Biological Station (KBS), Michigan State University's largest off-campus education complex, is located in Ross Township south of Hickory Corners, Michigan (about from the main campus).

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Legionella

The genus Legionella is a pathogenic group of Gram-negative bacteria that includes the species L. pneumophila, causing legionellosis (all illnesses caused by Legionella) including a pneumonia-type illness called Legionnaires' disease and a mild flu-like illness called Pontiac fever.

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Library of Congress Classification:Class Q -- Science

Class Q: Science is a classification used by the Library of Congress Classification system.

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Lily Young

Lily Young is a distinguished professor of environmental microbiology at Rutgers, The State University of New Jersey in New Brunswick.

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List of MeSH codes (G01)

The following is a list of the "G" codes for MeSH.

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List of MeSH codes (G03)

The following is a list of the "G" codes for MeSH.

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List of MeSH codes (H01)

The following is a list of the "H" codes for MeSH.

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Marine Biological Laboratory

The Marine Biological Laboratory (MBL) is an international center for research and education in biological and environmental science.

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Marine microorganism

Marine microorganisms are defined by their habitat as the microorganisms living in a marine environment, that is, in the saltwater of a sea or ocean or the brackish water of a coastal estuary.

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Martinus Beijerinck

No description.

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Mary Voytek

Dr.

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Metagenomics

Metagenomics is the study of genetic material recovered directly from environmental samples.

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Michael James (producer)

Michael James (born Michael James Marchesano; February 1, 1962) is an American record producer, mixing engineer, guitarist, and former A&R executive.

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Michigan State University Libraries

Michigan State University Libraries (MSU Libraries) comprise the 29th largest academic library system in North America with over 4.9 million volumes and 6.7 million microforms.

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Microbial biodegradation

Microbial biodegradation is the use of bioremediation and biotransformation methods to harness the naturally occurring ability of microbial xenobiotic metabolism to degrade, transform or accumulate environmental pollutants, including hydrocarbons (e.g. oil), polychlorinated biphenyls (PCBs), polyaromatic hydrocarbons (PAHs), heterocyclic compounds (such as pyridine or quinoline), pharmaceutical substances, radionuclides and metals.

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Microbial biogeography

Microbial biogeography is a subset of biogeography, a field that concerns the distribution of organisms across space and time.

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Microbial dark matter

Microbial dark matter comprises the vast majority of microbial organisms (usually bacteria and archaea) that biologists are unable to culture in lab due to lack of knowledge or ability to supply the required growth conditions.

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Microbial enhanced oil recovery

Microbial enhanced oil recovery (MEOR) is a biological based technology consisting in manipulating function or structure, or both, of microbial environments existing in oil reservoirs.

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Microbial metabolism

Microbial metabolism is the means by which a microbe obtains the energy and nutrients (e.g. carbon) it needs to live and reproduce.

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Microbial population biology

Microbial population biology is the application of the principles of population biology to microorganisms.

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Microbiological Research

Microbiological Research is an academic journal in microbiology, published by Elsevier.

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Microbiomes of the built environment

Microbiomes of the built environment is a field of inquiry focusing on the study of the communities of microorganisms found in human constructed environments (i.e., the built environment).

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Milton Wainwright

Milton Wainwright (born 23 February 1950) is a British microbiologist who is known for his research into what he claims could be extraterrestrial life found in the stratosphere.

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Moshe Shilo

Moshe Shilo (1920–1990) was a microbiologist working in the field of aquatic microbiology, at the Hebrew University of Jerusalem.

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Neorhizobium huautlense

Neorhizobium huautlense is a Gram negative root nodule bacteria.

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Nitrogen-15 tracing

Nitrogen-15 (15N) tracing is a technique to study the nitrogen cycle using the heavier, stable nitrogen isotope 15N.

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Oral ecology

Oral ecology refers to the organisms that live in a mouth.

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Oral microbiology

Oral microbiology is the study of the microorganisms (microbiota) of the oral cavity and their interactions between oral microorganisms or with the host.

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Outline of ecology

The following outline is provided as an overview of and topical guide to ecology: Ecology – scientific study of the distribution and abundance of living organisms and how the distribution and abundance are affected by interactions between the organisms and their environment.

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Outline of fishing

The following outline is provided as an overview of and topical guide to fishing: Fishing – activity of trying to catch fish.

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Pauline Mele

Associate Professor Pauline M. Mele was born on 25 January 1963 in Traralgon, Victoria.

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Phospholipid-derived fatty acids

Phospholipid-derived fatty acids (PLFA) are widely used in microbial ecology as chemotaxonomic markers of bacteria and other organisms.

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Phylosymbiosis

In the field of microbiome research, a group of species is said to show a phylosymbiotic signal if the degree of similarity between the species' microbiomes recapitulates to a significant extent their evolutionary history.

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Pityriasis amiantacea

Pityriasis amiantacea (also known as "Tinea amiantacea") is an eczematous condition of the scalp in which thick tenaciously adherent scale infiltrates and surrounds the base of a group of scalp hairs.

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Plymouth Marine Laboratory

Plymouth Marine Laboratory (abbreviated as PML) in the city of Plymouth, England, is an independent collaborative centre of the Natural Environment Research Council (NERC).

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Priming (microbiology)

Priming or a "Priming Effect" is said to occur when something that is added to soil or compost affects the rate of decomposition occurring on the soil organic matter (SOM), either positively or negatively.

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QIIME

QIIME (an abbreviation for Quantitative Insights Into Microbial Ecology) is a bioinformatic pipeline designated for the task of analysing microbial communities that were sampled through marker gene (e.g. 16S or 18S rRNA genes) amplicon sequencing.

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Rare biosphere

Rare biosphere refers to diverse rare species of bacteria, adapted to environmental conditions that are not common today.

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Richard Bartha

Richard Bartha (born in Hungary) is an American microbiologist.

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Richard Lenski

Richard Eimer Lenski (born August 13, 1956) is an American evolutionary biologist, a MacArthur "genius" fellow, a Hannah Distinguished Professor of Microbial Ecology at Michigan State University, and a member of the National Academy of Sciences.

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Robert Hungate

Robert Edward Hungate was a pioneering microbial ecologist who developed the first techniques for the culturing of anaerobic microbes in his study of the bovine rumen.

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Sergei Winogradsky

Sergei Nikolaievich Winogradsky (or Vinogradskiy; Сергій Миколайович Виноградський; 1 September 1856 – 25 February 1953) was a Russian microbiologist, ecologist and soil scientist who pioneered the cycle-of-life concept.

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Silicibacter pomeroyi

Silicibacter pomeroyi is a species of Gram-negative, rod-shaped, aerobic dimethylsulfoniopropionate-demethylating bacterium.

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Skin flora

The term skin flora (also commonly referred to as skin microbiota) refers to the microorganisms which reside on the skin, typically human skin.

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Soda lake

A soda lake or alkaline lake is a lake on the strongly alkaline side of neutrality, typically with a pH value between 9 and 12.

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Stable-isotope probing

Stable-isotope probing (SIP) is a technique in microbial ecology for tracing fluxes of nutrients in biogeochemical cycling by microorganisms.

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Steven D'Hondt

Steven D’Hondt is a geomicrobiologist who studies microbial communities living beneath the seafloor.

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Streamlining theory

Genomic streamlining is a theory in evolutionary biology and microbial ecology that suggests that there is a reproductive benefit to prokaryotes having a smaller genome size with less non-coding DNA and fewer non-essential genes.

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Succinic acid fermentation

Microbial production of Succinic acid can be performed with wild bacteria like Actinobacillus succinogenes, Mannheimia succiniciproducens and Anaerobiospirillum succiniciproducens or genetically modified Escherichia coli, Corynebacterium glutamicum and Saccharomyces cerevisia.

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Sulfide intrusion

In ecology, sulfide intrusion refers to an excess of sulfide molecules (S2-) in the soil that interfere with plant growth, often seagrass.

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The Geochemist's Workbench

The Geochemist's Workbench (GWB) is an integrated set of interactive software tools for solving a range of problems in aqueous chemistry.

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The ISME Journal

The ISME Journal: Multidisciplinary Journal of Microbial Ecology is a peer-reviewed scientific journal covering all areas of microbial ecology spanning the breadth of microbial life, including bacteria, archaea, microbial eukaryotes, and viruses.

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Trista Vick-Majors

Trista Vick-Majors is an American Antarctic biogeochemist and microbial ecologist, best known for her work showing that microorganisms are present under the Antarctic ice sheet.

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UniFrac

UniFrac is a distance metric used for comparing biological communities.

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University of Texas at San Antonio College of Sciences

The College of Sciences at the University of Texas at San Antonio is a college in research and science education.

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Velvl Greene

Velvl Greene (July 5, 1928 – November 21, 2011) was a Canadian–American–Israeli scientist and academic.

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Vivian Pellizari

Vivian Helena Pellizari is a Brazilian Antarctic scientist known for her work on establishing Antarctic microbiology in Brazil.

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Zetaproteobacteria

The class Zetaproteobacteria is the sixth and most recently described class of the Proteobacteria.

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Environmental microbiology, Microbial Ecology, Plant-based Culture Media.

References

[1] https://en.wikipedia.org/wiki/Microbial_ecology

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