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106 relations: Active site, Adenosine diphosphate, Adenosine triphosphate, Affinity chromatography, Algae, Alkalinity, Amino acid, Annals of the Missouri Botanical Garden, Arabidopsis thaliana, Bacteria, Biology, Biosequestration, Biosphere, C3 carbon fixation, C4 carbon fixation, Carbamate, Carbon cycle, Carbon dioxide, Carbon dioxide in Earth's atmosphere, Carbon fixation, Carboxylation, Carboxysome, Cell nucleus, Chemical reaction, Chemotroph, Chloroplast, Chloroplast DNA, Chloroplast membrane, Climate change, Concentration, Conformational isomerism, Crassulacean acid metabolism, Cyanobacteria, Cytosol, David Eisenberg, Dinoflagellate, Dithiothreitol, Electric field, Enzyme, Enzyme inhibitor, Enzyme promiscuity, Escherichia coli, Eukaryote, Fractionation, Fuel, Gel electrophoresis, Genetic engineering, Glucose, Glycine, Ion, ..., Kinase, Leaf, Light-dependent reactions, Light-independent reactions, Locus (genetics), Lysine, Magnesium, Mass spectrometry, Metabolite damage, Mitochondrion, Molecule, Mutation, Nabisco, Oxygen, Peroxisome, PH, Phosphate, Phosphoenolpyruvate carboxylase, Photorespiration, Photosynthesis, Photosynthetic efficiency, Phototroph, Phylogenetics, Plant taxonomy, Polymer, Protamine sulfate, Protease, Protein Data Bank, Protein dimer, Proteobacteria, Pyrenoid, Quadrupole, Red algae, Redox, Reverse Krebs cycle, Rhodospirillaceae, Rhodospirillum rubrum, Ribulose, Ribulose 1,5-bisphosphate, Sam Wildman, Site-directed mutagenesis, Stroma (fluid), Stromal cell, Substrate (chemistry), Synechococcus, Thioredoxin, Thylakoid, Total inorganic carbon, Transcription factor, Unified atomic mass unit, Vascular bundle, Wood–Ljungdahl pathway, X-ray crystallography, 2-Carboxy-D-arabinitol-1-phosphatase, 2-Carboxy-D-arabitinol 1-phosphate, 3-Hydroxypropionate bicycle. Expand index (56 more) »
Active site
In biology, the active site is the region of an enzyme where substrate molecules bind and undergo a chemical reaction.
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Adenosine diphosphate
Adenosine diphosphate (ADP), also known as adenosine pyrophosphate (APP), is an important organic compound in metabolism and is essential to the flow of energy in living cells.
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Adenosine triphosphate
Adenosine triphosphate (ATP) is a complex organic chemical that participates in many processes.
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Affinity chromatography
Affinity chromatography is a method of separating biochemical mixtures based on a highly specific interaction between antigen and antibody, enzyme and substrate, receptor and ligand, or protein and nucleic acid.
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Algae
Algae (singular alga) is an informal term for a large, diverse group of photosynthetic organisms that are not necessarily closely related, and is thus polyphyletic.
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Alkalinity
Alkalinity is the capacity of water to resist changes in pH that would make the water more acidic.
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Amino acid
Amino acids are organic compounds containing amine (-NH2) and carboxyl (-COOH) functional groups, along with a side chain (R group) specific to each amino acid.
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Annals of the Missouri Botanical Garden
The Annals of the Missouri Botanical Garden is a long-established major peer-reviewed journal of botany, established in 1914 by the Missouri Botanical Garden, under the directorship of botanist and phycologist, George Thomas Moore, and still published quarterly by the Missouri Botanical Garden Press.
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Arabidopsis thaliana
Arabidopsis thaliana, the thale cress, mouse-ear cress or arabidopsis, is a small flowering plant native to Eurasia and Africa.
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Bacteria
Bacteria (common noun bacteria, singular bacterium) is a type of biological cell.
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Biology
Biology is the natural science that studies life and living organisms, including their physical structure, chemical composition, function, development and evolution.
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Biosequestration
Biosequestration is the capture and storage of the atmospheric greenhouse gas carbon dioxide by biological processes.
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Biosphere
The biosphere (from Greek βίος bíos "life" and σφαῖρα sphaira "sphere") also known as the ecosphere (from Greek οἶκος oîkos "environment" and σφαῖρα), is the worldwide sum of all ecosystems.
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C3 carbon fixation
carbon fixation is one of three metabolic pathways for carbon fixation in photosynthesis, along with c4 and CAM.
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C4 carbon fixation
C4 carbon fixation or the Hatch-Slack pathway is a photosynthetic process in some plants.
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Carbamate
A carbamate is an organic compound derived from carbamic acid (NH2COOH).
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Carbon cycle
The carbon cycle is the biogeochemical cycle by which carbon is exchanged among the biosphere, pedosphere, geosphere, hydrosphere, and atmosphere of the Earth.
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Carbon dioxide
Carbon dioxide (chemical formula) is a colorless gas with a density about 60% higher than that of dry air.
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Carbon dioxide in Earth's atmosphere
Carbon dioxide is an important trace gas in Earth's atmosphere.
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Carbon fixation
Carbon fixation or сarbon assimilation is the conversion process of inorganic carbon (carbon dioxide) to organic compounds by living organisms.
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Carboxylation
Carboxylation is a chemical reaction in which a carboxylic acid group is produced by treating a substrate with carbon dioxide.
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Carboxysome
Carboxysomes are bacterial compartments consisting of polyhedral protein shells filled with the enzyme ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO) -the predominant enzyme in carbon fixation and the rate limiting enzyme in the Calvin Cycle-and a carbonic anhydrase.
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Cell nucleus
In cell biology, the nucleus (pl. nuclei; from Latin nucleus or nuculeus, meaning kernel or seed) is a membrane-enclosed organelle found in eukaryotic cells.
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Chemical reaction
A chemical reaction is a process that leads to the transformation of one set of chemical substances to another.
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Chemotroph
Chemotrophs are organisms that obtain energy by the oxidation of electron donors in their environments.
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Chloroplast
Chloroplasts are organelles, specialized compartments, in plant and algal cells.
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Chloroplast DNA
Chloroplasts have their own DNA, often abbreviated as cpDNA.
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Chloroplast membrane
Chloroplasts contain several important membranes, vital for their function.
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Climate change
Climate change is a change in the statistical distribution of weather patterns when that change lasts for an extended period of time (i.e., decades to millions of years).
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Concentration
In chemistry, concentration is the abundance of a constituent divided by the total volume of a mixture.
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Conformational isomerism
In chemistry, conformational isomerism is a form of stereoisomerism in which the isomers can be interconverted just by rotations about formally single bonds (refer to figure on single bond rotation).
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Crassulacean acid metabolism
Crassulacean acid metabolism, also known as CAM photosynthesis, is a carbon fixation pathway that evolved in some plants as an adaptation to arid conditions.
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Cyanobacteria
Cyanobacteria, also known as Cyanophyta, are a phylum of bacteria that obtain their energy through photosynthesis, and are the only photosynthetic prokaryotes able to produce oxygen.
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Cytosol
The cytosol, also known as intracellular fluid (ICF) or cytoplasmic matrix, is the liquid found inside cells.
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David Eisenberg
David S. Eisenberg (born 15 March 1939) is an American biochemist and biophysicist best known for his contributions to structural biology and computational molecular biology.
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Dinoflagellate
The dinoflagellates (Greek δῖνος dinos "whirling" and Latin flagellum "whip, scourge") are a large group of flagellate eukaryotes that constitute the phylum Dinoflagellata.
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Dithiothreitol
Dithiothreitol (DTT) is the common name for a small-molecule redox reagent also known as Cleland's reagent.
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Electric field
An electric field is a vector field surrounding an electric charge that exerts force on other charges, attracting or repelling them.
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Enzyme
Enzymes are macromolecular biological catalysts.
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Enzyme inhibitor
4QI9) An enzyme inhibitor is a molecule that binds to an enzyme and decreases its activity.
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Enzyme promiscuity
Enzyme promiscuity is the ability of an enzyme to catalyse a fortuitous side reaction in addition to its main reaction.
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Escherichia coli
Escherichia coli (also known as E. coli) is a Gram-negative, facultatively anaerobic, rod-shaped, coliform bacterium of the genus Escherichia that is commonly found in the lower intestine of warm-blooded organisms (endotherms).
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Eukaryote
Eukaryotes are organisms whose cells have a nucleus enclosed within membranes, unlike Prokaryotes (Bacteria and other Archaea).
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Fractionation
Fractionation is a separation process in which a certain quantity of a mixture (gas, solid, liquid, enzymes, suspension, or isotope) is divided during a phase transition, into a number of smaller quantities (fractions) in which the composition varies according to a gradient.
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Fuel
A fuel is any material that can be made to react with other substances so that it releases energy as heat energy or to be used for work.
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Gel electrophoresis
Gel electrophoresis is a method for separation and analysis of macromolecules (DNA, RNA and proteins) and their fragments, based on their size and charge.
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Genetic engineering
Genetic engineering, also called genetic modification or genetic manipulation, is the direct manipulation of an organism's genes using biotechnology.
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Glucose
Glucose is a simple sugar with the molecular formula C6H12O6.
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Glycine
Glycine (symbol Gly or G) is the amino acid that has a single hydrogen atom as its side chain.
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Ion
An ion is an atom or molecule that has a non-zero net electrical charge (its total number of electrons is not equal to its total number of protons).
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Kinase
In biochemistry, a kinase is an enzyme that catalyzes the transfer of phosphate groups from high-energy, phosphate-donating molecules to specific substrates.
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Leaf
A leaf is an organ of a vascular plant and is the principal lateral appendage of the stem.
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Light-dependent reactions
In photosynthesis, the light-dependent reactions take place on the thylakoid membranes.
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Light-independent reactions
The light-independent reactions, or dark reactions, of photosynthesis are chemical reactions that convert carbon dioxide and other compounds into glucose.
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Locus (genetics)
A locus (plural loci) in genetics is a fixed position on a chromosome, like the position of a gene or a marker (genetic marker).
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Lysine
Lysine (symbol Lys or K) is an α-amino acid that is used in the biosynthesis of proteins.
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Magnesium
Magnesium is a chemical element with symbol Mg and atomic number 12.
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Mass spectrometry
Mass spectrometry (MS) is an analytical technique that ionizes chemical species and sorts the ions based on their mass-to-charge ratio.
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Metabolite damage
Metabolite damage can occur through enzyme promiscuity or spontaneous chemical reactions.
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Mitochondrion
The mitochondrion (plural mitochondria) is a double-membrane-bound organelle found in most eukaryotic organisms.
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Molecule
A molecule is an electrically neutral group of two or more atoms held together by chemical bonds.
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Mutation
In biology, a mutation is the permanent alteration of the nucleotide sequence of the genome of an organism, virus, or extrachromosomal DNA or other genetic elements.
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Nabisco
Nabisco (from the National Biscuit Company) is an American manufacturer of cookies and snacks headquartered in East Hanover, New Jersey.
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Oxygen
Oxygen is a chemical element with symbol O and atomic number 8.
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Peroxisome
A peroxisome is a type of organelle known as a microbody, found in virtually all eukaryotic cells.
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PH
In chemistry, pH is a logarithmic scale used to specify the acidity or basicity of an aqueous solution.
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Phosphate
A phosphate is chemical derivative of phosphoric acid.
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Phosphoenolpyruvate carboxylase
Phosphoenolpyruvate carboxylase (also known as PEP carboxylase, PEPCase, or PEPC;, PDB ID: 3ZGE) is an enzyme in the family of carboxy-lyases found in plants and some bacteria that catalyzes the addition of bicarbonate (HCO3−) to phosphoenolpyruvate (PEP) to form the four-carbon compound oxaloacetate and inorganic phosphate: This reaction is used for carbon fixation in CAM (crassulacean acid metabolism) and C4 organisms, as well as to regulate flux through the citric acid cycle (also known as Krebs or TCA cycle) in bacteria and plants.
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Photorespiration
Photorespiration (also known as the oxidative photosynthetic carbon cycle, or C2 photosynthesis) refers to a process in plant metabolism where the enzyme RuBisCO oxygenates RuBP, causing some of the energy produced by photosynthesis to be wasted.
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Photosynthesis
Photosynthesis is a process used by plants and other organisms to convert light energy into chemical energy that can later be released to fuel the organisms' activities (energy transformation).
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Photosynthetic efficiency
The photosynthetic efficiency is the fraction of light energy converted into chemical energy during photosynthesis in plants and algae.
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Phototroph
Phototrophs (Gr: φῶς, φωτός.
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Phylogenetics
In biology, phylogenetics (Greek: φυλή, φῦλον – phylé, phylon.
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Plant taxonomy
Plant taxonomy is the science that finds, identifies, describes, classifies, and names plants.
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Polymer
A polymer (Greek poly-, "many" + -mer, "part") is a large molecule, or macromolecule, composed of many repeated subunits.
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Protamine sulfate
Protamine sulfate is a medication that is used to reverse the effects of heparin.
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Protease
A protease (also called a peptidase or proteinase) is an enzyme that performs proteolysis: protein catabolism by hydrolysis of peptide bonds.
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Protein Data Bank
The Protein Data Bank (PDB) is a crystallographic database for the three-dimensional structural data of large biological molecules, such as proteins and nucleic acids.
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Protein dimer
In biochemistry, a protein dimer is a macromolecular complex formed by two protein monomers, or single proteins, which are usually non-covalently bound.
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Proteobacteria
Proteobacteria is a major phylum of gram-negative bacteria. They include a wide variety of pathogens, such as Escherichia, Salmonella, Vibrio, Helicobacter, Yersinia, Legionellales, and many other notable genera. Others are free-living (non-parasitic), and include many of the bacteria responsible for nitrogen fixation. Carl Woese established this grouping in 1987, calling it informally the "purple bacteria and their relatives". Because of the great diversity of forms found in this group, it was named after Proteus, a Greek god of the sea capable of assuming many different shapes and is not named after the genus Proteus. Some Alphaproteobacteria can grow at very low levels of nutrients and have unusual morphology such as stalks and buds. Others include agriculturally important bacteria capable of inducing nitrogen fixation in symbiosis with plants. The type order is the Caulobacterales, comprising stalk-forming bacteria such as Caulobacter. The Betaproteobacteria are highly metabolically diverse and contain chemolithoautotrophs, photoautotrophs, and generalist heterotrophs. The type order is the Burkholderiales, comprising an enormous range of metabolic diversity, including opportunistic pathogens. The Hydrogenophilalia are obligate thermophiles and include heterotrophs and autotrophs. The type order is the Hydrogenophilales. The Gammaproteobacteria are the largest class in terms of species with validly published names. The type order is the Pseudomonadales, which include the genera Pseudomonas and the nitrogen-fixing Azotobacter. The Acidithiobacillia contain only sulfur, iron and uranium-oxidising autotrophs. The type order is the Acidithiobacillales, which includes economically important organisms used in the mining industry such as Acidithiobacillus spp. The Deltaproteobacteria include bacteria that are predators on other bacteria and are important contributors to the anaerobic side of the sulfur cycle. The type order is the Myxococcales, which includes organisms with self-organising abilities such as Myxococcus spp. The Epsilonproteobacteria are often slender, Gram-negative rods that are helical or curved. The type order is the Campylobacterales, which includes important food pathogens such as Campylobacter spp. The Oligoflexia are filamentous aerobes. The type order is the Oligoflexales, which contains the genus Oligoflexus.
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Pyrenoid
Pyrenoids are sub-cellular micro-compartments found in chloroplasts of many algae,Giordano, M., Beardall, J., & Raven, J. A. (2005).
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Quadrupole
A quadrupole or quadrapole is one of a sequence of configurations of things like electric charge or current, or gravitational mass that can exist in ideal form, but it is usually just part of a multipole expansion of a more complex structure reflecting various orders of complexity.
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Red algae
The red algae, or Rhodophyta, are one of the oldest groups of eukaryotic algae.
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Redox
Redox (short for reduction–oxidation reaction) (pronunciation: or) is a chemical reaction in which the oxidation states of atoms are changed.
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Reverse Krebs cycle
The reverse Krebs cycle (also known as the reverse tricarboxylic acid cycle, the reverse TCA cycle, or the reverse citric acid cycle) is a sequence of chemical reactions that are used by some bacteria to produce carbon compounds from carbon dioxide and water.
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Rhodospirillaceae
The Rhodospirillaceae are a family of Proteobacteria.
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Rhodospirillum rubrum
Rhodospirillum rubrum (R. rubrum) is a Gram-negative, pink-coloured Proteobacterium, with a size of 800 to 1000 nanometers.
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Ribulose
Ribulose is a ketopentose — a monosaccharide containing five carbon atoms, and including a ketone functional group.
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Ribulose 1,5-bisphosphate
Ribulose 1,5-bisphosphate (RuBP) is an organic substance that is involved in photosynthesis.
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Sam Wildman
Samuel Goodnow Wildman (May 26, 1912 – August 16, 2004) became Professor of Biology at the University of California, Los Angeles, first joining the university in 1950 and finally retiring in 1979.
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Site-directed mutagenesis
Site-directed mutagenesis is a molecular biology method that is used to make specific and intentional changes to the DNA sequence of a gene and any gene products.
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Stroma (fluid)
Stroma, in botany, refers to the colorless fluid surrounding the grana within the chloroplast.
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Stromal cell
Stromal cells are connective tissue cells of any organ, for example in the uterine mucosa (endometrium), prostate, bone marrow, lymph node and the ovary.
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Substrate (chemistry)
In chemistry, a substrate is typically the chemical species being observed in a chemical reaction, which reacts with a reagent to generate a product.
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Synechococcus
Synechococcus (from the Greek synechos, in succession, and the Greek kokkos, granule) is a unicellular cyanobacterium that is very widespread in the marine environment.
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Thioredoxin
Thioredoxin is a class of small redox proteins known to be present in all organisms.
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Thylakoid
A thylakoid is a membrane-bound compartment inside chloroplasts and cyanobacteria.
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Total inorganic carbon
The total inorganic carbon (CT, or TIC) or dissolved inorganic carbon (DIC) is the sum of inorganic carbon species in a solution.
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Transcription factor
In molecular biology, a transcription factor (TF) (or sequence-specific DNA-binding factor) is a protein that controls the rate of transcription of genetic information from DNA to messenger RNA, by binding to a specific DNA sequence.
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Unified atomic mass unit
The unified atomic mass unit or dalton (symbol: u, or Da) is a standard unit of mass that quantifies mass on an atomic or molecular scale (atomic mass).
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Vascular bundle
A vascular bundle is a part of the transport system in vascular plants.
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Wood–Ljungdahl pathway
The Wood–Ljungdahl pathway is a set of biochemical reactions used by some bacteria and archaea called acetogens.
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X-ray crystallography
X-ray crystallography is a technique used for determining the atomic and molecular structure of a crystal, in which the crystalline atoms cause a beam of incident X-rays to diffract into many specific directions.
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2-Carboxy-D-arabinitol-1-phosphatase
2-carboxy-D-arabinitol-1-phosphatase (also called CA1Pase) is an enzyme that catalyzes the chemical reaction Thus, the two substrates of this enzyme are 2-carboxy-D-arabinitol 1-phosphate and H2O, whereas its two products are 2-carboxy-D-arabinitol and phosphate.
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2-Carboxy-D-arabitinol 1-phosphate
2-Carboxy-D-arabitinol 1-phosphate (or CA1P) is a molecule produced in plants that inhibits the production of RuBisCO, a key enzyme in the Calvin cycle and carbon fixation.
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3-Hydroxypropionate bicycle
The 3-Hydroxypropionate bicycle, also known as the 3-Hydroxypropionate pathway, is a process that allows some bacteria to generate 3-Hydroxypropionate utilizing carbon dioxide.
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Redirects here:
3-phospho-D-glycerate carboxy-lyase (dimerizing; D-ribulose-1,5-bisphosphate-forming), EC 4.1.1.39, RUBISCO, RbcL, Ribulose 1-5-Biphosphate Carboxylase, Ribulose 15-Bisphosphate Carboxylase/Oxygenase, Ribulose biphoshate carboxylase, Ribulose biphosphate carboxylase, Ribulose biphosphate oxygenase, Ribulose bisphosphate carboxylase, Ribulose bisphosphate carboxylase/oxygenase, Ribulose bisphosphate oxygenase, Ribulose-1,5-bisphosphate carboxylase, Ribulose-1,5-bisphosphate carboxylase oxygenase, Ribulose-1,5-bisphosphate carboxylase/oxygenase, Ribulose-15-Bisphosphate Carboxylase, Ribulose-bisphosphate carboxylase, Ribulosebisphosphatecarboxylaseoxygenase, RuBP carboxylase, RuBPc/o, RuBPco, RuBisCO activase, RuBisCO large subunit, RuBisCo, RubisCO, Rubisco, Rubp Carboxylase/Oxygenase.
References
[1] https://en.wikipedia.org/wiki/RuBisCO
