Faster access than browser!
53 relations: Amino acid, Bioinformatics, Biology, Biomolecular structure, BLAST, Cell (biology), Consensus sequence, Conserved sequence, Database, DNA, DNA binding site, DNA-binding protein, Escherichia coli, Exon, GCM transcription factors, Gene, Genetic code, Genetics, Hidden Markov model, International Union of Pure and Applied Chemistry, IQ calmodulin-binding motif, MaMF, Minimotif Miner, Multiple EM for Motif Elicitation, N-linked glycosylation, Non-coding DNA, Nucleic acid, Nucleic acid sequence, Nucleotide, Operon, Phosphorylation, Phylogenetics, Planted motif search, Position weight matrix, PROSITE, Protein, Protein domain, Protein primary structure, Regular expression, Regulatory sequence, RNA splicing, Satellite DNA, Sequence, Sequence analysis, Sequence logo, Sequential pattern mining, Short linear motif, Signal peptide, Structural motif, Transcription factor, ..., TRANSFAC, Translation (biology), Zinc finger. Expand index (3 more) »
Amino acid
Amino acids are organic compounds containing amine (-NH2) and carboxyl (-COOH) functional groups, along with a side chain (R group) specific to each amino acid.
New!!: Sequence motif and Amino acid · See more »
Bioinformatics
Bioinformatics is an interdisciplinary field that develops methods and software tools for understanding biological data.
New!!: Sequence motif and Bioinformatics · See more »
Biology
Biology is the natural science that studies life and living organisms, including their physical structure, chemical composition, function, development and evolution.
New!!: Sequence motif and Biology · See more »
Biomolecular structure
Biomolecular structure is the intricate folded, three-dimensional shape that is formed by a molecule of protein, DNA, or RNA, and that is important to its function.
New!!: Sequence motif and Biomolecular structure · See more »
BLAST
In bioinformatics, BLAST for Basic Local Alignment Search Tool is an algorithm for comparing primary biological sequence information, such as the amino-acid sequences of proteins or the nucleotides of DNA sequences.
New!!: Sequence motif and BLAST · See more »
Cell (biology)
The cell (from Latin cella, meaning "small room") is the basic structural, functional, and biological unit of all known living organisms.
New!!: Sequence motif and Cell (biology) · See more »
Consensus sequence
In molecular biology and bioinformatics, the consensus sequence (or canonical sequence) is the calculated order of most frequent residues, either nucleotide or amino acid, found at each position in a sequence alignment.
New!!: Sequence motif and Consensus sequence · See more »
Conserved sequence
In evolutionary biology, conserved sequences are similar or identical sequences in nucleic acids (DNA and RNA) or proteins across species (orthologous sequences) or within a genome (paralogous sequences).
New!!: Sequence motif and Conserved sequence · See more »
Database
A database is an organized collection of data, stored and accessed electronically.
New!!: Sequence motif and Database · See more »
DNA
Deoxyribonucleic acid (DNA) is a thread-like chain of nucleotides carrying the genetic instructions used in the growth, development, functioning and reproduction of all known living organisms and many viruses.
New!!: Sequence motif and DNA · See more »
DNA binding site
DNA binding sites are a type of binding site found in DNA where other molecules may bind.
New!!: Sequence motif and DNA binding site · See more »
DNA-binding protein
DNA-binding proteins are proteins that have DNA-binding domains and thus have a specific or general affinity for single- or double-stranded DNA.
New!!: Sequence motif and DNA-binding protein · See more »
Escherichia coli
Escherichia coli (also known as E. coli) is a Gram-negative, facultatively anaerobic, rod-shaped, coliform bacterium of the genus Escherichia that is commonly found in the lower intestine of warm-blooded organisms (endotherms).
New!!: Sequence motif and Escherichia coli · See more »
Exon
An exon is any part of a gene that will encode a part of the final mature RNA produced by that gene after introns have been removed by RNA splicing.
New!!: Sequence motif and Exon · See more »
GCM transcription factors
In molecular biology, the GCM transcription factors are a family of proteins which contain a GCM motif.
New!!: Sequence motif and GCM transcription factors · See more »
Gene
In biology, a gene is a sequence of DNA or RNA that codes for a molecule that has a function.
New!!: Sequence motif and Gene · See more »
Genetic code
The genetic code is the set of rules used by living cells to translate information encoded within genetic material (DNA or mRNA sequences) into proteins.
New!!: Sequence motif and Genetic code · See more »
Genetics
Genetics is the study of genes, genetic variation, and heredity in living organisms.
New!!: Sequence motif and Genetics · See more »
Hidden Markov model
Hidden Markov Model (HMM) is a statistical Markov model in which the system being modeled is assumed to be a Markov process with unobserved (i.e. hidden) states.
New!!: Sequence motif and Hidden Markov model · See more »
International Union of Pure and Applied Chemistry
The International Union of Pure and Applied Chemistry (IUPAC) is an international federation of National Adhering Organizations that represents chemists in individual countries.
New!!: Sequence motif and International Union of Pure and Applied Chemistry · See more »
IQ calmodulin-binding motif
The IQ calmodulin-binding motif is an amino acid sequence motif containing the following sequence.
New!!: Sequence motif and IQ calmodulin-binding motif · See more »
MaMF
MaMF, or Mammalian Motif Finder, is an algorithm for identifying motifs to which transcription factors bind.
New!!: Sequence motif and MaMF · See more »
Minimotif Miner
Minimotif Miner is a program and database designed to identify minimotifs in any protein.
New!!: Sequence motif and Minimotif Miner · See more »
Multiple EM for Motif Elicitation
Multiple EM for Motif Elicitation (MEME) is a tool for discovering motifs in a group of related DNA or protein sequences.
New!!: Sequence motif and Multiple EM for Motif Elicitation · See more »
N-linked glycosylation
N-linked glycosylation, is the attachment of the sugar molecule oligosaccharide known as glycan to a nitrogen atom (the amide nitrogen of an asparagine (Asn) residue of a protein), in a process called N-glycosylation, studied in biochemistry.
New!!: Sequence motif and N-linked glycosylation · See more »
Non-coding DNA
In genomics and related disciplines, noncoding DNA sequences are components of an organism's DNA that do not encode protein sequences.
New!!: Sequence motif and Non-coding DNA · See more »
Nucleic acid
Nucleic acids are biopolymers, or small biomolecules, essential to all known forms of life.
New!!: Sequence motif and Nucleic acid · See more »
Nucleic acid sequence
A nucleic acid sequence is a succession of letters that indicate the order of nucleotides forming alleles within a DNA (using GACT) or RNA (GACU) molecule.
New!!: Sequence motif and Nucleic acid sequence · See more »
Nucleotide
Nucleotides are organic molecules that serve as the monomer units for forming the nucleic acid polymers deoxyribonucleic acid (DNA) and ribonucleic acid (RNA), both of which are essential biomolecules within all life-forms on Earth.
New!!: Sequence motif and Nucleotide · See more »
Operon
In genetics, an operon is a functioning unit of DNA containing a cluster of genes under the control of a single promoter.
New!!: Sequence motif and Operon · See more »
Phosphorylation
In chemistry, phosphorylation of a molecule is the attachment of a phosphoryl group.
New!!: Sequence motif and Phosphorylation · See more »
Phylogenetics
In biology, phylogenetics (Greek: φυλή, φῦλον – phylé, phylon.
New!!: Sequence motif and Phylogenetics · See more »
Planted motif search
In the field of computational biology, a planted motif search (PMS) also known as a (l, d)-motif search (LDMS) is a method for identifying conserved motifs within a set of nucleic acid or peptide sequences.
New!!: Sequence motif and Planted motif search · See more »
Position weight matrix
A position weight matrix (PWM), also known as a position-specific weight matrix (PSWM) or position-specific scoring matrix (PSSM), is a commonly used representation of motifs (patterns) in biological sequences.
New!!: Sequence motif and Position weight matrix · See more »
PROSITE
PROSITE is a protein database.
New!!: Sequence motif and PROSITE · See more »
Protein
Proteins are large biomolecules, or macromolecules, consisting of one or more long chains of amino acid residues.
New!!: Sequence motif and Protein · See more »
Protein domain
A protein domain is a conserved part of a given protein sequence and (tertiary) structure that can evolve, function, and exist independently of the rest of the protein chain.
New!!: Sequence motif and Protein domain · See more »
Protein primary structure
Protein primary structure is the linear sequence of amino acids in a peptide or protein.
New!!: Sequence motif and Protein primary structure · See more »
Regular expression
A regular expression, regex or regexp (sometimes called a rational expression) is, in theoretical computer science and formal language theory, a sequence of characters that define a search pattern.
New!!: Sequence motif and Regular expression · See more »
Regulatory sequence
A regulatory sequence is a segment of a nucleic acid molecule which is capable of increasing or decreasing the expression of specific genes within an organism.
New!!: Sequence motif and Regulatory sequence · See more »
RNA splicing
In molecular biology, splicing is the editing of the nascent precursor messenger RNA (pre-mRNA) transcript into a mature messenger RNA (mRNA).
New!!: Sequence motif and RNA splicing · See more »
Satellite DNA
Satellite DNA consists of very large arrays of tandemly repeating, non-coding DNA.
New!!: Sequence motif and Satellite DNA · See more »
Sequence
In mathematics, a sequence is an enumerated collection of objects in which repetitions are allowed.
New!!: Sequence motif and Sequence · See more »
Sequence analysis
In bioinformatics, sequence analysis is the process of subjecting a DNA, RNA or peptide sequence to any of a wide range of analytical methods to understand its features, function, structure, or evolution.
New!!: Sequence motif and Sequence analysis · See more »
Sequence logo
In bioinformatics, a sequence logo is a graphical representation of the sequence conservation of nucleotides (in a strand of DNA/RNA) or amino acids (in protein sequences).
New!!: Sequence motif and Sequence logo · See more »
Sequential pattern mining
Sequential pattern mining is a topic of data mining concerned with finding statistically relevant patterns between data examples where the values are delivered in a sequence.
New!!: Sequence motif and Sequential pattern mining · See more »
Short linear motif
In molecular biology Short Linear Motifs (also known as SLiMs, Linear Motifs or minimotifs) are short stretches of protein sequence that mediate protein–protein interaction.
New!!: Sequence motif and Short linear motif · See more »
Signal peptide
A signal peptide (sometimes referred to as signal sequence, targeting signal, localization signal, localization sequence, transit peptide, leader sequence or leader peptide) is a short peptide (usually 16-30 amino acids long) present at the N-terminus of the majority of newly synthesized proteins that are destined towards the secretory pathway.
New!!: Sequence motif and Signal peptide · See more »
Structural motif
In a chain-like biological molecule, such as a protein or nucleic acid, a structural motif is a supersecondary structure, which also appears in a variety of other molecules.
New!!: Sequence motif and Structural motif · See more »
Transcription factor
In molecular biology, a transcription factor (TF) (or sequence-specific DNA-binding factor) is a protein that controls the rate of transcription of genetic information from DNA to messenger RNA, by binding to a specific DNA sequence.
New!!: Sequence motif and Transcription factor · See more »
TRANSFAC
TRANSFAC (TRANScription FACtor database) is a manually curated database of eukaryotic transcription factors, their genomic binding sites and DNA binding profiles.
New!!: Sequence motif and TRANSFAC · See more »
Translation (biology)
In molecular biology and genetics, translation is the process in which ribosomes in the cytoplasm or ER synthesize proteins after the process of transcription of DNA to RNA in the cell's nucleus.
New!!: Sequence motif and Translation (biology) · See more »
Zinc finger
A zinc finger is a small protein structural motif that is characterized by the coordination of one or more zinc ions (Zn2+) in order to stabilize the fold.
New!!: Sequence motif and Zinc finger · See more »
Redirects here:
References
[1] https://en.wikipedia.org/wiki/Sequence_motif
