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72 relations: Amino acid, Assortativity, Atom, Betweenness centrality, Biological network inference, Biological system, Biome, Biostatistics, Bose–Einstein condensate, Bottlenose dolphin, Brain, Carbon, Centrality, Chacma baboon, ChIP-on-chip, ChIP-sequencing, Competition (companies), Complex system, Computational biology, Computer science, Connectivity (graph theory), Cooperative, Degree (graph theory), DNA, Ecological network, Enzyme, Finite-state machine, Fission–fusion society, Food chain, Food web, Gene, Gene regulatory network, Genome, Graph theory, Grévy's zebra, Human genome, Human impact on the environment, Interactome, Internet, List of omics topics in biology, MAPK/ERK pathway, Metabolic network, Modularity (networks), Network medicine, Network science, Network topology, Neural network, Neuron, Nitrogen, Omics, ..., Onager, Oxygen, Philosophical Transactions of the Royal Society B, Phylogenetic network, Physics, Physiology, Pollination network, Pollinator, Primate, Protein–protein interaction, Proteome, Search algorithm, Small-world network, Social network, Social network analysis, State (computer science), Statistics, Systems biology, Transcription factor, Two-hybrid screening, Vertex (graph theory), Weighted correlation network analysis. Expand index (22 more) »
Amino acid
Amino acids are organic compounds containing amine (-NH2) and carboxyl (-COOH) functional groups, along with a side chain (R group) specific to each amino acid.
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Assortativity
Assortativity, or assortative mixing is a preference for a network's nodes to attach to others that are similar in some way.
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Atom
An atom is the smallest constituent unit of ordinary matter that has the properties of a chemical element.
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Betweenness centrality
In graph theory, betweenness centrality is a measure of centrality in a graph based on shortest paths.
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Biological network inference
Biological network inference is the process of making inferences and predictions about biological networks.
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Biological system
A biological system is a complex network of biologically relevant entities.
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Biome
A biome is a community of plants and animals that have common characteristics for the environment they exist in.
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Biostatistics
Biostatistics is the application of statistics to a wide range of topics in biology.
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Bose–Einstein condensate
A Bose–Einstein condensate (BEC) is a state of matter of a dilute gas of bosons cooled to temperatures very close to absolute zero.
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Bottlenose dolphin
Bottlenose dolphins, the genus Tursiops, are the most common members of the family Delphinidae, the family of oceanic dolphin.
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Brain
The brain is an organ that serves as the center of the nervous system in all vertebrate and most invertebrate animals.
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Carbon
Carbon (from carbo "coal") is a chemical element with symbol C and atomic number 6.
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Centrality
In graph theory and network analysis, indicators of centrality identify the most important vertices within a graph.
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Chacma baboon
The chacma baboon (Papio ursinus), also known as the Cape baboon, is, like all other baboons, from the Old World monkey family.
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ChIP-on-chip
ChIP-on-chip (also known as ChIP-chip) is a technology that combines chromatin immunoprecipitation ('ChIP') with DNA microarray ("chip").
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ChIP-sequencing
ChIP-sequencing, also known as ChIP-seq, is a method used to analyze protein interactions with DNA.
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Competition (companies)
Company competition, or competitiveness, pertains to the ability and performance of a firm, sub-sector or country to sell and supply goods and services in a given market, in relation to the ability and performance of other firms, sub-sectors or countries in the same market.
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Complex system
A complex system is a system composed of many components which may interact with each other.
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Computational biology
Computational biology involves the development and application of data-analytical and theoretical methods, mathematical modeling and computational simulation techniques to the study of biological, behavioral, and social systems.
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Computer science
Computer science deals with the theoretical foundations of information and computation, together with practical techniques for the implementation and application of these foundations.
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Connectivity (graph theory)
In mathematics and computer science, connectivity is one of the basic concepts of graph theory: it asks for the minimum number of elements (nodes or edges) that need to be removed to disconnect the remaining nodes from each other.
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Cooperative
A cooperative (also known as co-operative, co-op, or coop) is "an autonomous association of persons united voluntarily to meet their common economic, social, and cultural needs and aspirations through a jointly-owned and democratically-controlled enterprise".
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Degree (graph theory)
In graph theory, the degree (or valency) of a vertex of a graph is the number of edges incident to the vertex, with loops counted twice.
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DNA
Deoxyribonucleic acid (DNA) is a thread-like chain of nucleotides carrying the genetic instructions used in the growth, development, functioning and reproduction of all known living organisms and many viruses.
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Ecological network
An ecological network is a representation of the biotic interactions in an ecosystem, in which species (nodes) are connected by pairwise interactions (links).
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Enzyme
Enzymes are macromolecular biological catalysts.
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Finite-state machine
A finite-state machine (FSM) or finite-state automaton (FSA, plural: automata), finite automaton, or simply a state machine, is a mathematical model of computation.
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Fission–fusion society
In ethology, a fission–fusion society is one in which the size and composition of the social group change as time passes and animals move throughout the environment; animals merge into a group (fusion)—e.g. sleeping in one place—or split (fission)—e.g. foraging in small groups during the day.
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Food chain
A food chain is a linear network of links in a food web starting from producer organisms (such as grass or trees which use radiation from the Sun to make their food) and ending at apex predator species (like grizzly bears or killer whales), detritivores (like earthworms or woodlice), or decomposer species (such as fungi or bacteria).
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Food web
A food web (or food cycle) is a natural interconnection of food chains and a graphical representation (usually an image) of what-eats-what in an ecological community.
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Gene
In biology, a gene is a sequence of DNA or RNA that codes for a molecule that has a function.
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Gene regulatory network
A gene (or genetic) regulatory network (GRN) is a collection of molecular regulators that interact with each other and with other substances in the cell to govern the gene expression levels of mRNA and proteins.
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Genome
In the fields of molecular biology and genetics, a genome is the genetic material of an organism.
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Graph theory
In mathematics, graph theory is the study of graphs, which are mathematical structures used to model pairwise relations between objects.
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Grévy's zebra
The Grévy's zebra (Equus grevyi), also known as the imperial zebra, is the largest living wild equid and the largest and most threatened of the three species of zebra, the other two being the plains zebra and the mountain zebra.
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Human genome
The human genome is the complete set of nucleic acid sequences for humans, encoded as DNA within the 23 chromosome pairs in cell nuclei and in a small DNA molecule found within individual mitochondria.
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Human impact on the environment
Human impact on the environment or anthropogenic impact on the environment includes changes to biophysical environments and ecosystems, biodiversity, and natural resources caused directly or indirectly by humans, including global warming, environmental degradation (such as ocean acidification), mass extinction and biodiversity loss, ecological crises, and ecological collapse.
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Interactome
In molecular biology, an interactome is the whole set of molecular interactions in a particular cell.
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Internet
The Internet is the global system of interconnected computer networks that use the Internet protocol suite (TCP/IP) to link devices worldwide.
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List of omics topics in biology
Inspired by the terms genome and genomics, other words to describe complete biological datasets, mostly sets of biomolecules originating from one organism, have been coined with the suffix -ome and -omics.
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MAPK/ERK pathway
The MAPK/ERK pathway (also known as the Ras-Raf-MEK-ERK pathway) is a chain of proteins in the cell that communicates a signal from a receptor on the surface of the cell to the DNA in the nucleus of the cell.
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Metabolic network
A metabolic network is the complete set of metabolic and physical processes that determine the physiological and biochemical properties of a cell.
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Modularity (networks)
Modularity is one measure of the structure of networks or graphs.
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Network medicine
Network medicine is the application of network science towards identifying, preventing, and treating diseases.
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Network science
Network science is an academic field which studies complex networks such as telecommunication networks, computer networks, biological networks, cognitive and semantic networks, and social networks, considering distinct elements or actors represented by nodes (or vertices) and the connections between the elements or actors as links (or edges).
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Network topology
Network topology is the arrangement of the elements (links, nodes, etc.) of a communication network.
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Neural network
The term neural network was traditionally used to refer to a network or circuit of neurons.
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Neuron
A neuron, also known as a neurone (British spelling) and nerve cell, is an electrically excitable cell that receives, processes, and transmits information through electrical and chemical signals.
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Nitrogen
Nitrogen is a chemical element with symbol N and atomic number 7.
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Omics
The English-language neologism omics informally refers to a field of study in biology ending in -omics, such as genomics, proteomics or metabolomics.
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Onager
The onager (Equus hemionus), also known as hemione or Asiatic wild ass, is a species of the family Equidae (horse family) native to Asia.
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Oxygen
Oxygen is a chemical element with symbol O and atomic number 8.
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Philosophical Transactions of the Royal Society B
Philosophical Transactions of the Royal Society B: Biological Sciences is a biweekly peer-reviewed scientific journal published by the Royal Society.
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Phylogenetic network
A phylogenetic network or reticulation is any graph used to visualize evolutionary relationships (either abstractly or explicitly)Huson, DH and Scornavacca, C (2011).
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Physics
Physics (from knowledge of nature, from φύσις phýsis "nature") is the natural science that studies matterAt the start of The Feynman Lectures on Physics, Richard Feynman offers the atomic hypothesis as the single most prolific scientific concept: "If, in some cataclysm, all scientific knowledge were to be destroyed one sentence what statement would contain the most information in the fewest words? I believe it is that all things are made up of atoms – little particles that move around in perpetual motion, attracting each other when they are a little distance apart, but repelling upon being squeezed into one another..." and its motion and behavior through space and time and that studies the related entities of energy and force."Physical science is that department of knowledge which relates to the order of nature, or, in other words, to the regular succession of events." Physics is one of the most fundamental scientific disciplines, and its main goal is to understand how the universe behaves."Physics is one of the most fundamental of the sciences. Scientists of all disciplines use the ideas of physics, including chemists who study the structure of molecules, paleontologists who try to reconstruct how dinosaurs walked, and climatologists who study how human activities affect the atmosphere and oceans. Physics is also the foundation of all engineering and technology. No engineer could design a flat-screen TV, an interplanetary spacecraft, or even a better mousetrap without first understanding the basic laws of physics. (...) You will come to see physics as a towering achievement of the human intellect in its quest to understand our world and ourselves."Physics is an experimental science. Physicists observe the phenomena of nature and try to find patterns that relate these phenomena.""Physics is the study of your world and the world and universe around you." Physics is one of the oldest academic disciplines and, through its inclusion of astronomy, perhaps the oldest. Over the last two millennia, physics, chemistry, biology, and certain branches of mathematics were a part of natural philosophy, but during the scientific revolution in the 17th century, these natural sciences emerged as unique research endeavors in their own right. Physics intersects with many interdisciplinary areas of research, such as biophysics and quantum chemistry, and the boundaries of physics are not rigidly defined. New ideas in physics often explain the fundamental mechanisms studied by other sciences and suggest new avenues of research in academic disciplines such as mathematics and philosophy. Advances in physics often enable advances in new technologies. For example, advances in the understanding of electromagnetism and nuclear physics led directly to the development of new products that have dramatically transformed modern-day society, such as television, computers, domestic appliances, and nuclear weapons; advances in thermodynamics led to the development of industrialization; and advances in mechanics inspired the development of calculus.
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Physiology
Physiology is the scientific study of normal mechanisms, and their interactions, which work within a living system.
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Pollination network
A pollination network is a bipartite mutualistic network in which plants and pollinators are the nodes, and the pollination interactions form the links between these nodes.
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Pollinator
A pollinator is an animal that moves pollen from the male anther of a flower to the female stigma of a flower.
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Primate
A primate is a mammal of the order Primates (Latin: "prime, first rank").
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Protein–protein interaction
Protein–protein interactions (PPIs) are the physical contacts of high specificity established between two or more protein molecules as a result of biochemical events steered by electrostatic forces including the hydrophobic effect.
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Proteome
The proteome is the entire set of proteins that is, or can be, expressed by a genome, cell, tissue, or organism at a certain time.
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Search algorithm
In computer science, a search algorithm is any algorithm which solves the search problem, namely, to retrieve information stored within some data structure, or calculated in the search space of a problem domain.
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Small-world network
A small-world network is a type of mathematical graph in which most nodes are not neighbors of one another, but the neighbors of any given node are likely to be neighbors of each other and most nodes can be reached from every other node by a small number of hops or steps.
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Social network
A social network is a social structure made up of a set of social actors (such as individuals or organizations), sets of dyadic ties, and other social interactions between actors.
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Social network analysis
Social network analysis (SNA) is the process of investigating social structures through the use of networks and graph theory.
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State (computer science)
In information technology and computer science, a program is described as stateful if it is designed to remember preceding events or user interactions; the remembered information is called the state of the system.
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Statistics
Statistics is a branch of mathematics dealing with the collection, analysis, interpretation, presentation, and organization of data.
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Systems biology
Systems biology is the computational and mathematical modeling of complex biological systems.
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Transcription factor
In molecular biology, a transcription factor (TF) (or sequence-specific DNA-binding factor) is a protein that controls the rate of transcription of genetic information from DNA to messenger RNA, by binding to a specific DNA sequence.
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Two-hybrid screening
Two-hybrid screening (originally known as yeast two-hybrid system or Y2H) is a molecular biology technique used to discover protein–protein interactions (PPIs) and protein–DNA interactions by testing for physical interactions (such as binding) between two proteins or a single protein and a DNA molecule, respectively.
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Vertex (graph theory)
In mathematics, and more specifically in graph theory, a vertex (plural vertices) or node is the fundamental unit of which graphs are formed: an undirected graph consists of a set of vertices and a set of edges (unordered pairs of vertices), while a directed graph consists of a set of vertices and a set of arcs (ordered pairs of vertices).
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Weighted correlation network analysis
Weighted correlation network analysis, also known as weighted gene co-expression network analysis (WGCNA), is a widely used data mining method especially for studying biological networks based on pairwise correlations between variables.
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References
[1] https://en.wikipedia.org/wiki/Biological_network
